FAIR WISH: FAIR Workflows to establish IGSN for Samples in the Helmholtz Association

FAIR WISH

Project Partners: GFZ, AWI, HZG

FAIR Workflows to establish IGSN for Samples in the Helmholtz Association” (FAIR WISH) is a joint project between the Helmholtz Centres GFZ, AWI and Hereon funded within the HMC Project Cohorte 2020 of the Helmholtz Metadata Collaboration Platform HMC.

The International Generic Sample Number (IGSN) is a globally unique and persistent identifier (PID) for physical samples and collections with discovery function in the internet. IGSNs enable to directly link data and publications with samples they originate from and thus close one of the last gaps in the full provenance of research results.

FAIR WISH will (1) develop standardised and discipline specific IGSN metadata schemes for different samples types within the research field Earth and Environment (EaE) that are complementing the core IGSN metadata schema; and (2) develop workflows to generate machine-readable IGSN metadata from different states of digitisation (from templates to databases) and to automatically register IGSNs. Our use cases were selected to include the large variety of sample types from different sub-disciplines across the project partners (e.g. terrestrial, marine environments, rock, soil, vegetation, water samples) and represent all states of digitization: from individual scientists, collecting sample descriptions in their field books to digital sample management systems fed by an app that is used in the field.

Project presentations and outcome are published within the FAIR WISH Zenodo Community
https://zenodo.org/communities/fair_wish/?page=1&size=20
List of identified linked open data vocabularies to be included in IGSN metadata
https://zenodo.org/record/6787200#.ZBL73R8xmUk
Project slides from the „HMC Project Welcome Meeting” April 2021
https://helmholtz-metadaten.de/storage/1117/04_FAIR-WISH_HMC.pdf

References:

Baldewein, Linda, Brauser, Alexander, Elger, Kirsten, Heim, Birgit, & Wieczorek, Mareike. (2022). FAIR WISH D1 - List of identified linked open data vocabularies to be included in IGSN metadata (Version 1). Zenodo. https://doi.org/10.5281/zenodo.6787200

Brauser, A., Wieczorek, M., Frenzel, S., Heim, B., Baldewein, L., Kleeberg, U., & Elger, K. (2023). FAIR WISH: Sample description template. Zenodo. https://doi.org/10.5281/ZENODO.7520015

Elger, K., Frenzel, S., & Brauser, A. (2022). IGSN International Generic Sample Numbers - uniquely identifying your samples. https://doi.org/10.5281/ZENODO.7370845

Wieczorek, Mareike, Heim, Birgit, Brauser, Alexander, Elger, Kirsten, & Baldewein, Linda.

(2022a). FAIR WISH D2 - Exemplary standardised metadata templates for Geo-Bio samples (vegetation, wa-ter, sediment, rock samples) for all use cases. Zenodo. https://doi.org/10.5281/zenodo.7147532

Wieczorek, Mareike, Heim, Birgit, Brauser, Alexander, Elger, Kirsten, & Baldewein, Linda. (2022b). FAIR WISH D3 - Assisting and Assessing User application of the FAIR SAMPLES Template. Zenodo. https://doi.org/10.5281/zenodo.7377904

Wieczorek, Mareike, Brauser, Alexander, Heim, Birgit, Baldewein, Linda, & Elger, Kirsten. (2022c). Video Tutorial for the FAIR SAMPLES Template. Zenodo. https://doi.org/10.5281/zenodo.7381390