2024

• Kubin, Markus; Sedeqi, Mojeeb Rahman; Schmidt Alexander; Gilein, Astrid; Glodwoski, Tempest; Preuß, Gabriel; Mannix, Oonagh; A data-driven approach to monitor and improve open and FAIR research data in a federated research ecosystem, https://doi.org/10.5334/dsj-2024-041

2023

• Ballani, Felix; Schaller, Theresa; Steinmeier, Leon; Koubaa, Mohammed Anis; Schweikert, Jan; Stucky, Karl-Uwe; Süß, Wolfgang; Report on research data management interviews conducted for HMC Hub Energy in 2022 (2023), https://publikationen.bibliothek.kit.edu/1000164395.

• Blumenröhr, Nicolas; Aversa, Rossella; From implementation to application: FAIR digital objects for training data composition, Technical paper (2023), https://doi.org/10.3897/rio.9.e108706.

• Buttigieg, Pier; Mannix, Oonagh; Preuß, Gabriel; Fathalla, Said; D'Mello, Fiona; Sandfeld, Stefan; The Helmholtz Knowledge Graph & the unified Helmholtz information and data exchange (unHIDE), Conference Paper (2023), https://zenodo.org/records/10043115.

• Ihsan, Ahmad Zainul; Fathalla, Said; Sandfeld, Stefan; DISO: A Domain Ontology for Modeling Dislocations in Crystalline Materials, Conference paper (2023), https://doi.org/10.1145/3555776.3578739.

2022

• Heidrich, Benedikt; Schmieder, Kai; Süß, Wolfgang; Hagenmeyer, Veit; Controlling Non-Stationarity and Periodicities in Time Series Generation Using Conditional Invertible Neural Networks, Journal APIN, url:https://link.springer.com/article/10.1007/s10489-022-03742-7.

• Jejkal, Thomas; Chelbi, Sabrine; Pfeil, Andreas; Wittenburg, Peter; Evaluation of Application Possibilities for Packaging Technologies in Canonical Workflows, Data Intelligence (2022), 4 (2), doi:10.1162/dint_a_00137.

• Pfeil, Andreas; Jejkal, Thomas; Tonne, Danah;  Götzelmann, Germaine; From a Dynamic Image Annotation Process within the Humanities to a Canonical Workflow, Data Intelligence (2022), 4 (2), doi:10.1162/dint_a_00138.

2021

• Andersen, Casper W.; Aversa, Rosella; OPTIMADE, an API for exchanging materials data, 2021, Scientific Data, 8(1), 217, doi:10.1038/s41597-021-00974-z.

• Iglezakis, Dorothea; Stotzka, Rainer; Interoperabilität von Metadaten innerhalb der NFDI, 2021, Bausteine Forschungsdatenmanagement, doi:10.17192/BFDM.2021.2.8313.

• Dimitrova, Mariya; Buttigieg, Pier Luigi; A streamlined workflow for conversion, peer review, and publication of genomics metadata as omics data papers, 2021, GigaScience, Volume 10, Issue 5, giab034, doi:10.1093/gigascience/giab034.

• Jackson, Rebecca; Buttigieg, Pier Luigi; OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies, 2021, Database, Volume 2021, 2021, baab069, doi:10.1093/database/baab069.

• Wierling, August; Hoyer-Klick, Carsten; Süß, Wolfgang; FAIR Metadata Standards for Low Carbon Energy Research—A Review of Practices and How to Advance, 2021, Energies, 14(20), 6692, doi:10.3390/en14206692.

2022

• Schweikert, Jan; Stucky, Karl-Uwe; Koubaa, Mohamed Anis; Süß, Wolfgang; Hagenmeyer, Veit; Implementation of a Photovoltaic System Model Using FAIR Digital Objects, Proceedings FDO Conference, doi:10.3897/rio.8.e93929.

2021

• Buttigieg, Pier Luigi; Evolving the UNESCO/IOC Ocean Best Practices System: preparing methods for the oceans’ digital ecosystem, 2021, url:https://imdis.seadatanet.org/files/IMDIS2021_147_abstract.pdf.

• Meyer, Raïssa; Buttigieg, Pier Luigi; Aligning Standards Communities: Sustainable Darwin Core MIxS Interoperability, 2021, Biodiversity Information Science and Standards, 5, e73775, doi:10.3897/biss.5.73775.

2024

• Duchon, A Platform Ecosystem Providing New Data For The Energy Transition, https://energy.acm.org/eir

• Fathalla, S.; Günther, G.; Steinmeier, L.; Lemster, C.; Kottmeier, D.; Sivapatham, L.; Buttigieg, P.; Hofmann, V.; Sandfeld, S.; The Helmholtz Digitisation Ontology: Representing Digital Assets in the Helmholtz Digital Ecosystem

• Hoyer-Klick, Carsten; Ferenz, Stephan; Hofmann, Christian; Werth, Oliver; FAIR Data for Energy Systems Research, https://doi.org/10.5445/IR/1000178413

• Kulla, Lucas; Schader, Philipp; Maier-Hein, Klaus; Nolden, Marco; Harmonized Import of Clinical Research Data for the Open Source Image Analysis Platform Kaapana, https://doi.org/10.1007/978-3-658-44037-4_31

• Schmidt, Andreas; Koubaa, Mohamed Anis; Liu, Nan; Schmurr, Philipp; Stucky, Karl-Uwe; Süß, Wolfgang; FAIRlead: A Conceptual Framework for a Model Driven Software Development Approach in the Field of FAIR Data Management, https://doi.org/10.5220/0013013700003838

• Schmidt, Andreas; Koubaa, Mohamed Anis; Liu, Nan; Stucky, Karl-Uwe; Süß, Wolfgang; Metadata Extraction from a Huge Time Series Database, https://doi.org/10.5281/zenodo.10625406

• Schmidt, Andreas; Münch, Tobias; Enable Business Users to Embed Dynamic Database Content in Existing Web-Based Systems Using Web Components and Generic Web Services, https://doi.org/10.5220/0013000000003825

• Schmidt, Andreas; Münch, Tobias; Web Components for Database Developers, ISBN 978-1-68558-138-1

• Schmurr, Philipp; Schmidt, Andreas; Stucky, Karl-Uwe; Suess Wolfgang; Hagenmeyer, Veit; Performing Entity Relationship Model Extraction from Data and Schema Information as a Basis for Data Integration, https://doi.org/10.5220/0013012600003838

• Schmidt, Andreas; Koubaa, Mohamed Anis; Liu, Nan; Stucky, Karl-Uwe; Süß, Wolfgang; Hagenmeyer, Veit; Towards a Conceptionand the Implementation of FAIR Data Management Tools for the Energy Domain, https://doi.org/10.5281/zenodo.10614813

• Fathalla, Said; Günther, Gerrit; Steinmeier, Leon; Lemster, Christine; Kottmeier, Dorothee; Sivapatham, Lakxmi; Buttigieg, Pier Luigi; Hofmann, Volker; Sandfeld, Stefan; The Helmholtz Digitization Ontology: Representing Digital Assets in the Helmholtz Digital Ecosystem, https://ceur-ws.org/Vol-3759/paper11.pdf

• Bröder, Jens; Preuß, Gabriel; Dmello, Fiona; Fathalla, Said; Hofmann, Volker; Sandfeld, Stefan; The Helmholtz Knowledge Graph: Driving the Transition Towards a FAIR Data Ecosystem in the Helmholtz Association, https://doi.org/10.34734/FZJ-2024-03156

2023

• Blumenröhr, Nicolas; McKinnon, Neil; Aversa, Rossella; FAIR Data Management Workflow for MRI Data, Conference Proceedings (2023), https://doi.org/10.4126/FRL01-006444992.

• Günther, Gerrit; Mannix, Oonagh; Ruslan, Ovsyannikov; Vadilonga, Simone; FAIR Data of Physical and Digital Beamlines, Conference proceedings (2023), https://doi.org/10.18429/JACoW-ICALEPCS2023-THMBCMO17.

• Günther, Gerrit; Baunack, Sebastian; Capozza, Luigi; Freyermuth, Oliver; Camina, Pau Gonzalez; Gou, Boxing; Isaak, Johann; Karstensen, Sven; Lindner, Axel; Maas, Frank; Mannix, Oonagh; Mistry, Andrew; Oceano, Isabella; Schneide, Christiane; Schörner-Sadenius, Thomas; Schwarz, Kilian; Serve, Vivien; Stein, Lisa-Marie; Typel, Stefan; Wilfert, Malte C.; IR of FAIR - Principles at the Instrument Level, Conference proceedings (2023), doi:10.18429/JACoW-ICALEPCS2023-WE3BCO09;

• Kades, Klaus; Scherer, Jonas; Scholtyssek, Jan; Penzkofer, Tobiasl; Nolden, Marco; Maier-Hein, Klaus; Efficient DICOM-Image Tagging and Cohort Curation within Kaapana, Conference proceedings (2023), https://doi.org/10.1007/978-3-658-36932-3_59.

• Karstensen, Sven; Caminal, Pau Gonzalez; Günther, Gerrit; Lindner, Axel; Mannix, Oonagh; Creating of HDF5 Files as Data Source for Analyses Using the Example of ALPS IIc and the DOOCS Control System, Conference proceedings (2023), doi:10.18429/JACoW-ICALEPCS2023-THPDP101.

• Koubaa, Mohamad Anis; Süß, Wolfgang; Stucky, Karl-Uwe; Schmidt, Andreas; Semantico - Toolchain for literature classification, Conference proceedings (2023) doi:10.5281/zenodo.8420493.

• Kulla, Lucas; Bröder, Jens; Curdt, Constanze; Kubin, Markus; Kollai, Helen; Lemster, Christine; Nolden, Marco; Schmieder, Kai; Strupp, Annika; Stucky, Karl-Uwe; The HMC Information Portal for Enhanced Metadata Collaboration in the Helmholtz FAIR Data Space, Conference proceedings (2023), https://doi.org/10.52825/cordi.v1i.383.

• Ost, Philipp; Shakeel, Yusra; Tögel, Philipp; Data Collections Explorer - An Easy-to-Use Tool for Sharing and Discovering Research Data, Conference proceedings (2023), https://doi.org/10.52825/cordi.v1i.405.

• Pirogov, Anton; Soylu, Mustafa; D'Mello, Fiona; Hofmann, Volker; Sandfeld, Stefan, Metador: A metadata-centric framework for enabling FAIR research (meta) data handling, Conference proceedings (2023), https://doi.org/10.5281/zenodo.8431502.

• Preuß, Gabriel; Schmidt, Alexander; Sedeqi, Mojeeb; Serve, Vivien; Mannix, Oonagh; Kubin, Markus; Monitoring the State of Open and FAIR Data in Helmholtz, Conference proceedings (2023), https://doi.org/10.52825/cordi.v1i.389.

• Schmidt, Andreas; Koubaa, Mohamad Anis; Schweikert, Jan; Stucky, Karl-Uwe; Süß, Wolfgang; Hagenmeyer, Veit; A Generic Tool Supporting the Dissemination of Time Series Data Following FAIR Principles, Conference proceedings (2023), doi:10.5220/0012254300003598.

• Schmidt, Andreas; Koubaa, Mohamad Anis; Practical Data Science Using the Shell, Conference proceedings (2023), https://publikationen.bibliothek.kit.edu/1000165322.

• Schmidt, Andreas; Koubaa, Mohamad Anis; Schweikert, Jan; Stucky, Karl-Uwe; Süß, Wolfgang; Zeitgeist: An Interactive FAIR Data Publishing System for Time Series Data, Conference proceedings (2023), doi:10.5281/zenodo.8382658.

• Soylu, Mustafa; Pirogov, Anton; Hofmann, Volker; Sandfeld, Stefan; Automating Metadata Handling in Research Software Engineering, Conference proceedings (2023), https://doi.org/10.5281/zenodo.8431462.

• Vadilonga, Simone; Günther, Gerrit; Advancements in Beamline Digital Twin at BESSYII, Conference proceedings (2023), https://doi.org/10.18429/JACoW-ICALEPCS2023-THMBCMO18.

2022

• Ruiz, Arellano; Hoyer-Klick, Carsten; Competency questions for a test first development of an energy systems analysis ontology (ceur-ws.org), Proceeding of The Eighth Joint Ontology Workshops (JOWO’22).

• Schweikert, Jan; Stucky, Karl-Uwe; Süß, Wolfgang; Hagenmeyer, Veit; A Photovoltaic System Model Integrating FAIR Digital Objects and Ontologies, Proceedings IEEE Sege, doi:10.1109/SEGE55279.2022.9889768.

• Kades, Klaus; Scholtyssek, Jan; Nolden, Marco; Maier-Hein, Klaus; Efficient DICOM Image Tagging and Cohort Curation Within Kaapana, Conference Proceedings, Bildverarbeitung Für Die Medizin, doi:10.1007/978-3-658-36932-3_59.

2021

• Günther, Gerrit; Smith William; Kubin, Markus; Mannix, Oonagh; FAIR meets EMIL: Principles in Practice, 2021, ICALEPCS 2021, Joint accelerator conferences website (JACoW), doi:10.18429/JACoW-ICALEPCS2021-WEBL05.

• Ihsan, Ahmad Z.; Steps towards a Dislocation Ontology for Crystalline Materials In by García-Castro, Raúl; Davies, John; Antoniou, Grigoris and Fortuna, Carolina (eds.) “CEUR Workshop Proceedings”, Vol. 2887, url: http://ceur-ws.org/Vol-2887/paper4.pdf.        

• Joseph, Reetu; Ihsan, Ahmad Z.; Sandfeld, Stefan; Stotzka, Rainer; Metadata schema to support FAIR data in scanning electron microscopy, 2021, CEUR Workshop Proceedings, 3036, doi:10.5445/IR/1000141604.

2024

• Villamar, Jose; Kelbling, Matthias; More, Heather; Denker, Michael; Tetzlaff, Tom; Senk, Johanna; Thober, Stephan; Metadata practices for simulation workflows, arXiv:2408.17309

2023

• Kubin, Markus; Gilein, Astrid; Glodowski, Tempest; Mannix, Oonagh; Preuß, Gabriel; Schmidt, Alexander; Sedeqi, Mojeeb Rahman; Serve, Vivien; Launch Meeting: HMC Dashboard on Open and FAIR Data in Helmholtz, Resource (2023), https://doi.org/10.5281/zenodo.7693377.

• Kubin, Markus; Monitoring Data Publications - A Dashboard Approach in HMC Hub Matter, Resource (2023), 10.5281/ZENODO.7313753.

• Kulla, Lucas; Schader, Philipp; Maier-Hein, Klaus; Harmonized import of clinical research data for the open source image analysis platform Kaapana, Bachelor thesis (2023).

• Mannix, Oonagh; Kubin, Markus; Preuß, Gabriel; Schmidt, Alexander Matthias; Gilein, Astrid; Serve, Vivien; HMC Dashboard on Open and FAIR Data in Helmholtz, Resource (2023), https://doi.org/10.5281/zenodo.10493175.

• Schweikert, Jan; Stucky, Karl-Uwe; Süß, Wolfgang; Hagenmeyer, Veit; A Photovoltaic System Model Integrating FAIR Digital Objects and Ontologies, Journal (2023), https://doi.org/10.3390/en16031444.

• Sedeqi, Mojeeb Rahman; Schmidt, Alexander; Gilein, Astrid; Serve, Vivien; Glodowski, Tempest; Preuß, Gabrie; Mannix, Oonagh; A data-driven approach to improve distributed FAIR data in a cross disciplinary organization, Resource (2023), https://doi.org/10.5281/zenodo.10406094.

• Sedeqi, Mojeeb Rahman; Schmidt, Alexander; Gilein, Astrid; Glodowski, Tempest; Serve, Vivien; Mannix, Oonagh; Preuß, Gabriel; HMC Dashboard zu offenen und FAIRen Daten in der Helmholtz-Gemeinschaft, Resource (2023), https://doi.org/10.5281/zenodo.10244979.

• Özkan, Özlem; Mannix, Oonagh; Is your data policy findable and accessible? Check these four elements, Resource (2023), https://doi.org/10.5281/zenodo.10074955.

• Özkan, Özlem; Research Data Policies: Best Practices and Essential Elements, Resource (2023), https://doi.org/10.5281/zenodo.10451379.

• Özkan, Özlem; Sustainability of Research Data Management, Resource (2023), https://doi.org/10.5281/zenodo.7993280.

• Özkan, Özlem; Umbrella Data Policy for Multi-divisional Research Centers (2023),https://www.wikoop-infra.de/sites/sites_custom/site_wikoop-infra/content/e215411/e21732 6/e217391/Oezkan_Workshop2023_Helmholtz_ScientificDataManagement_ger.pdf.

2022

• Ihsan, Ahmad Zainul; Fathalla, Said; Sandfeld, Stefan; Dislocation Ontology (DISO), url:https://purls.helmholtz-metadaten.de/disos/diso.

• Arndt, Susanne; Hofmann, Volker; Söding, Emanuel; Cookbooks, Guidance, and Best Practices, Working Group Charter (NFDI section-metadata), doi:10.5281/zenodo.6758256.

• Götzelmann, Germaine, Computergestützte Analyse von Illustrationswiederverwendungen in deutschsprachigen Drucken des 16. Jahrhunderts, Dissertation, 05.05.2022.

• Duda, Leonhard Johannes; Design und Implementierung eines XML-basierten Metadaten-Editors, Bachelor Thesis, 31.05.2022.

• Gilein, Astrid; Virtueller Werkzeugkasten für Data Mining und FAIR-Data-Metriken von Datenpublikationen, Bachelor Thesis.

• Tzotchev, Nicola; A Software Library for Research Data Packaging and Exchange, Bachelor Thesis, 17.05.2022.

2021

• Stotzka, Rainer; RDA Interest Group Charter: FAIR Digital Object Fabric, 12/2021, doi:10.5281/ZENODO.6321983.

• Eberl, Christop; Sandfeld, Stefan; Stotzka, Rainer; Consortium Proposal NFDI-MatWerk, 2021, doi:10.5281/ZENODO.5082837.

• Koepler, Oliver; Stotzka, Rainer; Sektionskonzept Meta(daten), Terminologien und Provenienz zur Einrichtung einer Sektion im Verein Nationale Forschungsdateninfrastruktur (NFDI) e.V., 2021, doi:10.5281/ZENODO.5619089.

• Samuel, Robyn M.; Meyer, Raissa; Buttigieg, Pier Luigi; Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and Research, 2021, Frontiers in Marine Science, 8, doi:10.3389/fmars.2021.758694.